PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10023345
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family S1Fa-like
Protein Properties Length: 1444aa    MW: 161712 Da    PI: 9.463
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10023345genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA61.61.5e-19138114431370
         S1FA   13 PGlivllvvgglllvflvgnyilyvyaqknlPPrk.....kkPvskkklkreklkqGvavPGe 70  
                    G++v+ +v glll+f+vgny+ly ya ++    k     kk vskkk+kre++kqG+ vPG+
  Lus10023345 1381 QGMVVFGIVVGLLLLFVVGNYLLYSYATRQSKNSKkmmmvKKAVSKKKMKRERIKQGIFVPGD 1443
                   69*************************887766552555579*******************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF086373.2E-68307581IPR013946Nuclear control of ATP synthase 2
PfamPF097861.6E-2086261281IPR019176Cytochrome B561-related
PfamPF046892.8E-1713811443IPR006779DNA binding protein S1FA
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1444 aa     Download sequence    Send to blast
MEENGAGEAE VHGVKHLVSF YSNQVWNRLT AFFPSDSNFL GRIASIRRQT VRRHDLFLPL  60
PLSSHILDSY LMKPGSSRVY DVLQDILERS YNNLHSIQKN LLFWECRAEG SEREKLYFML  120
LERGPRAFID GTVQLVRETL KDGFSTQQLA LSASAFINER LVVLRTLRCA IAAFLAEVYR  180
EVDKRGKDLT EDPDKAFPSL LFTIDNLFST LEASIGHLHA MREAGSSVDG SYSLPLLFEK  240
LPEVNQDGSE WTDCEITDAI GVVYKNLEKL DSYLSLVVVK HQKPRKLTQH WIRYTCGAIG  300
FSVCSIWVLR HSRLMGSSDI DNWIHEARDS IASFYEDHVE QPILSIRDEL FDTFRKRHKG  360
VMEIEEVQLT AGSLHRMLLA FSEQTQGGSF PENASDQKML ELVMGRYEKE LEHPIHNLVK  420
GELARALLIQ VQKLKLDIET AMLELDQILK ANEINFAILA ALPAFALSVV LLMLLRAWIK  480
QDTRAEGRGR IARRHRRLLL AEVEKSIMQY QIYLDHGLGT ESQSMFGMVL YSLNRLCLAV  540
ERHAKATGEW RLLRQDIMEL GKPGLKTEYK LRVTLRMERA YECLLPSTTR IFQLRSGERS  600
CQFSFPLQHS ATMEGRSSPP ASKSAKFAVY QNPSLTAALA ASSLQPSKST FLYIVLLSVA  660
SALALFSIVS RENGFIEMVE VSFFSRRAAY IFAKVVEGVV GVLFVGCLFG LLRVISWKRV  720
GNVASVPMIT SPETKDLPKL TSRQLGFLGV RPKVEAIPVE YSKKPPKSKP TPASDLLVPI  780
HQQTTGSNLR SRVTSDKSSL GSGNKMSSFG SPSKSQSSPS SMYLVPRISS PLPSGQSSSG  840
MDSAVSTPWS SKRAFSAKEI VTEEELEKFL ADVDAKFTES AGKHTTPPPT VRGFGILSPG  900
NVPSPTNTSG TTRSTPLRPV RMSPGSQKFA TPPKKGEGEL PPPMSMEEAI EAFKHLGIYP  960
QIEQWRDRLR QWFSSVLLGL LINKIETSHI QVMQTAAELG IAITVNQVGN SATSDTPATL  1020
SSIDGKEWQS AFTFDEDGRL HQLRATLVHA IDASAPKFNQ FNKQQSPQPN PMAPVMQKCL  1080
DAITEHQKLR ALMKGDWGKG LLPYSNVRED HMVQRIRELA EGTCVKNFEY IRTGEAYDTK  1140
NKKQTLDLPT DSHLLLYLFC AFLEHPKWML HVDPTSHAGA QSSKNPLFLG VLPPKERFPE  1200
KYVAVVSAVP STLHPGSCIL VMGKQSPPVF ALYWDKMQQF SLQGRTALWD SIILMCHRIK  1260
FGYGSVVRGM HLGSSALNIL PEKATLQLVI AEKLHENSRI SGDKPEGKSS IDLEEDAIKS  1320
KQGSHCCFYP IMDLDEFVSW TPEKPKKTYF IRNGRMGRDK NGKMIIRENE DDVQSNSSNK  1380
QGMVVFGIVV GLLLLFVVGN YLLYSYATRQ SKNSKKMMMV KKAVSKKKMK RERIKQGIFV  1440
PGD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-